SemiBin

SemiBin is a metagenomic binning tool (MAG builder). It is based on deep contrastive learning to incorporate background information (from reference genomes).

It achieves better results than other tools across a range of microbial habitats (both host-associated and environmental habitats).

SemiBin links

• SemiBin Github repository
• Manuscript: Shaojun Pan et al. A deep siamese neural network improves metagenome-assembled genomes in microbiome datasets across different environments